Advisory Committee on the Microbiological Safety of Food |
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MICROBIAL ANTIBIOTIC RESISTANCE in Relation to Food Safety SYNOPSIS Advises the Government on the Microbiological Safety of Food London: The Stationery Office |
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| Report on Microbial Antibiotic Resistance in Relation
to Food Safety SYNOPSIS Introduction |
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| During. the course of 1995 the Advisory Committee on the Microbiological Safety of Food (ACMSF) took stock of the position in relation to antibiotic resistance in enteric bacteria infecting animals and man with a view to deciding whether the Committee nee ded to involve itself further in assessing the situation, given the work already being undertaken in this area by other bodies and agencies. The Committee's consideration of th e issue took place against the background of concern about a rising incidence of certain antibiotic-resistant enteric pathogens in humans and animals. Exploratory consultations with other committees and bodies having interests and responsibilities in the subject encouraged the ACMSF to embark upon an in depth review of the role of good in transferring microbial antibiotic resistance. | |
| A Working Group with the following terms of reference
was set up for this purpose. TERMS OF REFERENCE To assess the risks to humans from antibiotic resistant microorganisms entering the food chain and to consider the need for any action to protect public health Membership of the Working Group, details of which are given in the Annex, included individuals with experience spanning medical and veterinary science, microbiology, public health, the food industry, farming and consumer issues. The Group had particular expertise in relation to microbial antibiotic resistance. The Group held its first meeting on 30 August 1996. The Report produced by the Working Group and endorsed by the full Committee represents the outcome of a comprehensive study of what is an extremely complex subject. By way of preparation, the Group carried out an in depth evaluation of relevant scient ific literature and also undertook wide ranging consultations with interested parties including the pharmaceutical industry, farming bodies, the veterinary and medical professions, consumer groups, food companies and other experts. Consultation embraced both written submissions by interested parties and detailed oral presentations by key stakeholders. The Working Group was also assisted by a special literature review and associated international workshop, both sponsored by the Ministry of Agriculture, F isheries and Food. A fact finding visit was made by a Working Group delegation to Sweden to examine the outcome there of the ban on antibiotic growth promoters in 1986. Given the complexity of the subject and the depth in which the ACMSF has covered i t, the Report is necessarily a large document. It is therefore prefaced with an extended Overview and Summary section which distils the conclusions and recommendations and includes a broad strategy for reducing the use of antibiotics in the rearing of food animals. |
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SUMMARY AND OVERVIEW
8. There is a fundamental question which superimposes itself on
our consideration of the issue of microbial antibiotic resistance
in relation to food safety. It is whether the administration of
antibiotics to animals results in the selection of resistant
bacteria which may be transferred to humans in food and cause
human infections which are difficult to treat.
9. This question has been the subject of heated debate for more
than 40 years, but never more so than now. Much of modern
medicine depends upon the control of infection with antibiotics
and, if this were to become largely ineffective, it would have
calamitous consequences.
10. The deepening anxiety over antibiotic resistance which is
evident today is a result not only of a recognition of the
seriousness of its consequences but also the apparently
inexorable growth in the number of resistant bacteria. This
anxiety has been enhanced by the realisation that the discovery
of "new" antibiotics which can replace those that have
become ineffective is now, at least, extremely rare.
11. When a bacterial population is exposed to an antibiotic, the
few relatively resistant organisms have a selective advantage
over those fully sensitive organisms whose growth is inhibited,
and the greater and more frequent the exposure, the greater the
selective pressure. Moreover, some resistant bacteria are capable
of transmitting genetic elements to sensitive bacteria, rendering
the recipient organisms resistant to antibiotics they have never
encountered. It is highly probable that the greatest stimulant to
the production of resistant bacteria in humans is the use of
antibiotics in human medicine and, for this reason, doctors are
now being exhorted to use antibiotics only when they are of
proven value. In the United Kingdom, it is no longer acceptable
for doctors to prescribe antibiotics for viral infections, or
other conditions for which they are ineffective, in the unfounded
hope that they might do some good.
12. If the administration of antibiotics to food animals results
in an acceleration in the rate at which antibiotic resistance is
emerging in humans, there is clearly a case for restricting the
use of antibiotics in animals, particularly as the resistant
bacteria would be capable of causing not only gastroenteric
infections but other serious illnesses. Some people, albeit now a
minority of those who have considered the problem, believe that
the case has not been made for such a restriction, but many
others believe that it shows conclusively that giving antibiotics
to animals results in the emergence of some resistance bacteria
which infect humans. Furthermore, the potential for resistant
bacteria from animals to transfer genetic elements which confer
resistance to bacteria pathogenic to humans exacerbates the
problem. However, the extent to which antibiotics given to
animals contributes to the overall problem of bacterial
antibiotic resistance in humans is uncertain and the evidence and
information needed to resolve the uncertainty is lacking.
13. For more than a year we have tried, unsuccessfully, to
discover the amounts of antibiotics used in animals in the UK,
the numbers and species of animals to which they were given, and
the purpose of administration. We recognise that much of this
information is commercially sensitive/or difficult to assemble.
We nevertheless believe that a robust system to gather this
information should be put in place as soon as possible.
14. Studies on the emergence of bacterial resistance in animals
given antibiotics are few, and little research has been done into
the transmission of resistant bacteria in food to humans. Without
more and better research and surveillance studies, the extent to
which giving antibiotics to animals results in antibiotic
resistance in bacteria in humans will remain largely unresolved.
We have made a number of recommendations in respect of these
problems.
15. In spite of the difficulties, we believe that sufficient
evidence exists to support the recommendations we have made
which, if implemented, will result in a reduction in the use of
some antibiotics in animals, particularly where effective
alternatives exist or where they are being used as a substitute
for hygienic animal husbandry. Moreover, such a reduction will
not only benefit humans. It will carry the added bonus of
prolonging the effective life of those antibiotics used in animal
therapy. As far as the use of antibiotics for animal growth
promotion is concerned, our recommendations are based largely on
the principles set down by the SWANN Committee in 1969. We
believe that these are as valid today as they were when they were
first made.
16. Many of the recommendations we have made will require
discussions and action at a European Union or wider international
level, and not merely for legalistic reasons. Bacteria, whether
or not they are resistant to antibiotics, do not recognise
international frontiers and there is enormous international trade
in food. There may therefore be little point in banning the use
of an antibiotic in the UK whilst importing food, with its
accompanying bacteria, from other countries in which no such ban
exists. Such action might have little effect on antibiotic
resistance and, at the same time, place British agriculture at a
competitive disadvantage. This does not mean that nothing can be
done. We found clear evidence of an international determination
to take steps to reduce the rate at which antibiotic resistance
is emerging, and some steps can and should be taken in the UK now
so that future generations can enjoy the maximum benefits of
effective antibiotic therapy.
Antimicrobials, antibiotics and resistance
17. Our Report addresses the question of microbial antibiotic
resistance in relation to food safety. It might, at the outset,
be helpful to define what we mean by the terms antimicrobial
agent, antibiotic and antibiotic resistance :-
an antimicrobial agent is a compound which, at low
concentrations, exerts an action against microorganisms and
exhibits selective toxicity towards them . The term antimicrobial
includes any substance of natural, synthetic or semi-synthetic
origin which is used to kill the growth of microorganisms
(bacteria, fungi, protoza and viruses). Antimicrobials include
antibiotics, disinfectants, preservatives and other substances
(eg. copper, zinc);
an antibiotic is a substance - produced by, or derived from, a
microorganism - which selectively destroys, or inhibits the
growth of, other microorganisms. Because compounds such as
sulphonamides and quinolones are synthesised chemically, they are
not strictly antibiotics. However, in practice the term
"antibiotics" often encompasses such agents and this
broader view has been adopted in the terminology used in this
Report,
antibiotic resistance is the ability of a microorganism to
withstand an antibiotic.
Use of antibiotics in animals
18. There has been widespread use of antibiotics in human and
animal medicine, and in animal husbandry, over the past 60 years.
This has led to the emergence of antibiotic resistance in some
bacterial species. Historically many of the antibiotics which are
important in human clinical use have, because of their efficacy,
also been used in veterinary medicine. In addition, the
veterinary use of antibiotics has not been confined to therapy of
clinical cases but has also embraced treatment of clinically
normal but infected animals, prophylaxis and growth promotion. To
avoid confusion, it should be noted that, for the purposes of our
Report, we have ascribed the following meanings to these terms:-
therapy the treatment of disorders or disease;
prophylaxis : the administration of antibiotics in advance of
symptomatic disease;
metaphylaxis the use of antibiotics for the prevention of disease
or the control of its spread. In the context of farmed livestock,
when an animal which is kept, as part of a group, in close
proximity to others contracts an infection, there is a high
probability that others in the group will also be infected,
whether or not they are exhibiting symptoms at the time. The
administration of antibiotics to all animals in contact within
the group, to treat a symptomatic disease in some and to prevent
disease in others, is what we regard as metaphylaxis;
growth-promoters antimicrobials used in low concentrations to
stimulate an animals growth, resulting in increased daily
liveweight gain and feed conversion efficiency. The mode of
action of growth promoters is thought to be associated with their
effect on the composition and distribution of the intestinal
microflora.
19. Concern has been expressed both nationally and
internationally about the long-term use of antibiotics in
animals. The question of whether the use of antibiotics in
animals serves to compromise the treatment of infectious disease
in humans has been addressed by a number of committees, bodies
and organisations world-wide. In the UK, the topic has been
addressed in various reports, notably those of the Netherthorpe
Committee in 1962, the Swann Committee in 1969, and the Lamming
Committee in 1992. An underlying and recurrent theme from these
reports, which are examined in greater detail in Annex A of our
Report, has been the potential threat of establishing resistant
microorganisms in food animal populations and the consequent need
to restrict the use of antibiotics in animal husbandry.
20 More recently, the World Health Organisation (WHO) held a
meeting in 1997 on the use of antimicrobials in feed animals. The
principal aims were to obtain an international consensus on
priority medical problems arising from the use of antimicrobials
in livestock production; and recommend steps to advance the
development of guidelines for the control and containment of the
emergence of medically-relevant antimicrobial resistance in food
animals. We have noted the strength of the conclusions and
recommendations which emerged from the meeting, notably that:-
the use of any antimicrobial agent for growth promotion in
animals should be terminated if it is used for human therapeutics
or known to select for cross-resistance to antimicrobials used in
human medicine;
national authorities should define threshold levels of resistance
in bacteria and circumstances where mitigation procedures should
be instigated and, if such procedures are unsuccessful, when
approval should be withdrawn; and
no antimicrobial should be administered to a food animal unless
it has been evaluated and authorised by the competent national
authorities. Evaluation should include a thorough risk assessment
(including the development of resistance which may impact on
public health); a post-marketing monitoring programme to detect
the emergence of resistance of public health significance; and,
if such emergence is detected, appropriate action should be taken
which may include the withdrawal of the antimicrobial in
question.
21. The WHO held a further meeting in June 1998 at which the
problems associated with the use of quinolones in food animals
and the potential impact on human health were addressed. The
meeting called, amongst other things, for research to be
conducted in connection with quinolone resistance.
22. The House of Lords' 1998 "Report on Resistance to
Antibiotics and other Antimicrobial Agents" called for the
voluntary phasing out of the use of virginiamycin for growth
promotion and a Code of Prescribing Practice for veterinarians. A
House of Commons Report on "Food Safety" in 1998 went
further, calling for a ban on the use of antibiotics in farming
as growth promoters, and tighter restrictions on their use for
sub-therapeutic or prophylactic purposes.
23. Consumer groups have also been actively involved in
consideration of the issue and two in particular (the Consumers
in Europe group, and the National Consumer Council) drew the
ACMSF Working Group's attention to their various concerns.
Developments in a food safety context
24. The issues considered by the ACMSF in a food safety context
include:-
the high prevalence of multiply-resistant strains of Salmonella
typhimurium definitive phage type (DT) 104 and evidence of
food-associated infection;
concern of campylobacters developing resistance as a consequence
of quinolone usage in farming;
the therapeutic and prophylactic use in animals of antibiotics of
importance in treatment of human infections;
EU consideration of the case for banning the use as growth
promoters of a number of antibiotics
the different approach to the veterinary (as compared with the
human clinical) use of antibiotics whereby drugs are administered
to large groups of animals or poultry at the first appearance of
disease, on the premise that this is the most effective means of
preventing the spread of disease within the group;
the important part played by antibiotics in the development of
modern aquaculture.
the possibility that imported foods might be more likely to
contain' antibiotic-resistant organisms than
domestically-produced food as a consequence of the freer
availability of antibiotics to agricultural producers in other
countries; and
the use of antibiotic markers in genetically-modified food
organisms.
25. On this last point, this is an issue which has been kept
under close scrutiny by the Advisory Committee on Novel Foods and
Processes (ACNFP). For this reason, the ACMSF has not itself
considered the matter in any detail. We support the ACNFP's
approach to assessing the safety of antibiotic resistance markers
in food genetically modified organisms and its policy of
encouraging the use of alternative marker systems wherever
possible.
Antibiotics in human medicine
26 Whilst we have concentrated in our Report on the question of
microbial antibiotic resistance in relation to food safety, we do
recognise the argument that human exposure to resistant bacteria
through food chain pathways is part of a much larger issue of
resistance and that the contribution of antibiotics used in
animal husbandry may be small compared with the contribution made
by the use of these drugs in community and general practice. Data
are not easy to obtain on the amount of antibiotics used in
animal populations or of the numbers of animals treated and it
would add enormously to the transparency of the situation if
there was structured monitoring of the drugs used, the purposes
for which they were used and the quantities concerned. However,
even if we accept as a working hypothesis that antibiotic usage
is greater in human than in veterinary medicine, this is not and
cannot be sufficient reason for ignoring the contribution to
resistance arising from farm use and transmission via food. Put
another way, evidence of the abuse of antibiotics in humans would
not of itself excuse any abuse in veterinary medicine. The aim
should be to work towards responsible use in both areas. We
welcome the initiatives taken by the medical profession, as
described in the recent report of the Standing Medical Advisory
Committee. We support the recommendations and look to the
veterinary profession and the farming industry to adopt a similar
philosophy.
Evidence of resistance
27. It is clear that scientific evidence exists that bacteria can
acquire resistance through a number of well recognised mechanisms
(eg. selection of chromosomal resistance or acquisition of
transferable DNA by transformation or conjugation). The more that
bacteria are exposed to antibiotics, the better developed their
defence mechanisms become and the more adept they become at
developing resistance. Given the wealth of available evidence,
the Committee firmly believes that, when antibiotics are used in
food animals, selection pressures are likely to result in the
emergence of resistant strains of bacteria. Moreover, it is clear
that some of the resistant strains seen in food animals are
capable of infecting humans. The ability of microorganisms to
transfer resistance adds to the concerns about multiple-resistant
strains like S. typhimurium DT 1O4 entering the food chain.
28. The Committee is conscious of the claim by some parties that
there is no compelling evidence of the existence of widespread
microbial antibiotic resistance in food animal populations. This
reflects the paucity of surveillance and research specifically
focusing on problems of resistance. We have confirmed through
talking to the pharmaceutical companies themselves that their
policy has been to concentrate resources on demonstrating the
sensitivity of the majority of pathogenic bacteria to
antibiotics. The implication of the appearance of local pockets
of resistance needs to be raised to a much higher level of
debate. The pharmaceutical companies must monitor where
resistance arises and report to the licensing authorities on
specific instances and trends. Such information should then be
the basis for action by the licensing authorities to rescind
product licences where the use of antibiotics in animals is seen
to compromise the treatment of human disease.
29. We believe, despite some views to the contrary, that
resistant bacteria in food animals have arisen as a consequence
of the use of antibiotics in the farm environment and current
husbandry practice. We are convinced that this is often the
origin of at least some of the same resistant bacteria like
Salmonella and Campylobacter which appear both in farm animals
and humans. We are also satisfied that some resistant bacteria
will find their way to man through food chain exposure pathways,
although the importance of direct animal exposure is not
overlooked.
30. These views are underpinned by a MAFF-sponsored review
between August 1997 and February 1998. The literature on
antimicrobial resistance in bacteria associated with foodborne
infections was reviewed by a network comprising four teams at the
University of Birmingham Medical School, the University of
Glasgow Veterinary School, the University of Liverpool Medical
School, and the Royal Veterinary College Department of Farm
Animal and Equine Medicine and Surgery.
The expertise of the four groups, and advisers from the
University of Glasgow Veterinary School and the Scottish Centre
for Infection and Environmental Health, was used to evaluate the
literature, identify gaps in knowledge and to present the results
in the light of their experience. The review was followed by a
workshop held in Birmingham in October 1997 involving the
investigators, representatives of the sponsors, and invited
experts in the field of antimicrobial resistance from the United
Kingdom, Europe and the United States of America. A report of the
review and workshop was subsequently produced as a technical
guide for MAFF and also to help inform the ACMSF's consideration
of the question of microbial antibiotic resistance in relation to
food safety.
31. Of particular concern are the quinolones (and the fluorinated
quinolones - the fluoroquinolones - developed from these original
agents). These are the synthetic antibiotics whose mode of action
is to inhibit DNA gyrase and topoisomerase IV in susceptible
bacteria. The fluoroquinolones, eg. ciprofloxacin, are invaluable
agents for the treatment in humans of Gram-negative and
Gram-positive infections,, including those caused by
methicillin-resistant Staphylococcus aureus (ciprofloxacin,
usually in combination with rifampicin - although mutational
resistance may emerge as a result of the therapeutic use of these
agents), and of enteric fevers caused by Salmonella typhi and
Salmonella paratyphi A, B and C. It was hoped, when the
quinolones were first introduced, that their mode of action would
make the development of resistance in bacteria, including the
campylobacters, almost impossible. Unfortunately, this prediction
proved to be over-optimistic and we are now increasingly seeing
quinolone-resistant campylobacters. Campylobacters are, of
course, the most commonly recognised foodborne pathogens in the
UK and poultry meat is an important reservoir for Campylobacter
jejuni and Campylobacter coli. There is significant usage of the
quinolone enrofloxacin in poultry production and there is a
belief that the emergence of quinolone-resistant campylobacters
reflects the use of the drugs in veterinary medicine
Growth promoters
32. We specifically considered the use of antibiotic substances
as growth promoters in food animals and their relevance to the
problem of antibiotic resistance. In the past, growth promoters
have been generally regarded as of no (or little) direct use in
human clinical medicine. However, they are able to give rise to
antibiotic resistance, in some cases in a way which could impact
on the use of related substances in human medicine.
It should also be kept in mind that clinical applications of
related substances might be developed at some future date. The
Committee fully supports the recommendations of the SWANN
Committee. To comply with SWANN, antibiotics which are used for
the treatment of infections in humans and animals should not be
used as growth promoters. Having considered the matter very
carefully, we concluded that it would be prudent to phase out the
use as growth promoters of spiramycin, tylosin phosphate and
virginiamycin which might give rise to resistance to clinical
antibiotics. We felt additionally that those remaining for use as
growth promoters - avilamycin, bambermycin, bacitracin zinc,
monensin sodium and salinomycin - should be more closely
controlled, with regular reviews of possible implications in
human medicine. We note that olaquindox, copper and zinc are also
used for growth promotion and it is for consideration whether
they select for antibiotic resistance. Finally, we concluded that
no new products for use as growth promoters should be developed
which utilise substances which have possible applications in
human clinical treatment.
33. The growth promoter category of antibiotics is controlled
under EC Directive 70/524/EEC and any action to suspend the use
of specific agents requires Government action at EU level. With
developments in the EU in mind, and conscious that the Government
was likely to have to take a view on the question of growth
promoters before we had had an opportunity to finalise our
Report, the Chairman wrote to Jeffrey Rooker MP, Minister of
State at MAFF, on 8 July 1998 setting out the Working Group's
views and recommendations (Annex H of our Report). These have
since been endorsed by the full ACMSE The EU Agriculture Council
decided on 14 December 1998 that the use of bacitracin zinc,
spiramycin, tylosin phosphate and virginiamycin should be
suspended from 1 January 1999 (but with provision for the
introduction of the suspension to be delayed for 6 months).
Good farming practice
34. Vital in tackling the problem of microbial antibiotic
resistance will be the preparedness of the livestock industry to
accept that the adoption of good farming practice can
significantly reduce the need to use antibiotics. We detect, and
welcome recent signs that the farming and veterinary communities
are increasingly coming to accept the principle that antibiotics
should not be used to compensate for poor farming practice and
weak standards of management. The Swedish example shows that it
is possible through the adoption of good farming practice to
reduce significantly reliance on antibiotics for both therapy and
prophylaxis. We look to the leaders of industry to take these
matters forward. We believe the will to do this exists. It is
worthy of note that, during the comparatively short time scale of
the Working Group's deliberations, there has been a key
redefinition of the position of important representative bodies
like the British Veterinary Association (BVA), the National
Farmers' Union (NFU) and the British Poultry Meat Federation
(BPMF) to embrace recognition that the status quo cannot
reasonably be maintained. We should like to see this momentum
sustained. To facilitate the evolutionary process, we would wish
to see a multidisciplinary liaison group, along the lines
proposed by the BPMF, being set up to monitor developments in
bacterial resistance to antibiotics, with a view to identifying
action which could be taken on a coordinated basis to address any
emerging trends. We welcome the setting up of the Responsible Use
of Medicines in Agriculture (RUMA) Alliance whose stated aim is
to establish guidelines to help the livestock industry reduce its
reliance on antibiotic substances
Aquaculture
35. We note the way in which, as the aquaculture industry has
developed over time, increasing use has been made of vaccination,
with a corresponding fall in the use of antibiotic treatments. We
applaud these developments and look to the industry to sustain
this approach as it develops new species like sea bass and sea
bream.
Companion animals
36. Although the main thrust of our Report is directed towards
the food chain pathways through which people may be exposed to
resistant microorganisms, we acknowledge the contribution of
companion animals (cats, dogs, etc) to the pool of resistance.
There is bound to be a continuous exchange of organisms between
humans and companion animals, given the routinely close contact
between the two groups, and there is thus a potential for a
significant transfer of resistant organisms too. By the same
token, the use of antibiotics in ornamental fish poses a
potential risk through direct contact exposure.
Sewage sludge, farm effluents and abattoir waste
37. We have some concerns about the potential role played by the
disposal of sewage sludge, farm effluents and abattoir waste to
pasture and other agricultural land in spreading resistant
bacteria more widely in livestock and human populations. There
are very large volumes of waste materials involved and the
implications of these disposal routes merit further attention.
Conclusions
38. Overall, the aim must be to reduce the exposure of farm
animal bacterial populations to antibiotics. In Chapter 13 of our
Report we map out a strategy for attaining this objective and for
achieving benefits both immediately and in the medium to
long-term. We see the key elements in such a strategy as :-
constraining the use of growth promoters;
paying much greater attention to the question of resistance in
the approval procedures for veterinary medicines and in
post-marketing surveillance;
stimulation of the farming industry, its suppliers and the
veterinary professions to develop strategies for reducing the use
of antibiotics for therapy, prophylaxis etc over time and
confronting the difficulties caused by the veterinary use of
fiuoroquinolones;
introducing tighter controls on medicated animal feedingstuffs;
and
improving our understanding of resistance in bacteria isolated
from food animals and foodstuffs, of human infections associated
with antibiotic-resistant foodborne pathogens, and of the ways in
which the food chain contributes to human infections with
antibiotic resistant microorganisms.
39. Such a strategy would reduce the chances both of acquisition
of resistance by pathogenic microorganisms and of transmissible
resistance by other parts of the farm animal microbial flora. We
have had clear advice that the danger of antibiotic-resistant
microorganisms in the food chain can be reduced through the
raising of husbandry standards across the industry, and by the
closer focus of veterinarians and farmers on the threat of
microbial antibiotic resistance. In parallel with this, there
should be a tightening of controls covering the licensing of
antibiotics so that the development of bacterial resistance in
animals given antibiotics can be monitored, evidence of any
cross-resistance to other antibiotics can be detected and
consideration can be given to appropriate action to minimise the
risks.
40. We note that a number of important bodies, including Select
Committees of both Houses of Parliament, the World Health
Organisation and others, who have looked most recently at the
question of microbial antibiotic resistance have reached broadly
similar conclusions to those which we have ourselves reached in
our Report. We look to the Government and, when established and
where appropriate, the Food Standards Agency, to respond
positively to this body of opinion and more specifically to the
recommendations which we have made.
The Report
41. Against the background of our various concerns, we believe
that there is a need to tackle the problem of microbial
antibiotic resistance on a broad front. Specific areas which
would benefit from urgent attention in the short to medium term
are identified in the various Chapters of our Report.
Chapter 1: Background to the Review
42. Chapter I sets out the background to our concerns over
microbial antibiotic resistance and the consequent setting up of
a Working Group to consider the matter in some depth. The Chapter
includes the terms of reference of the Group and the scope of its
work.
Chapter 2: Mechanisms of Antibiotic Resistance
43. Chapter 2 deals with the mechanisms of antibiotic resistance.
Resistance may appear as a result of mutation or by the
acquisition of resistance genes. Resistance genes may be located
in plasmids or chromosomes and, within these, on transposons or
within integrons. The frequency of mutation giving rise to
antibiotic resistance is normally low under natural conditions
but antibiotics create a selection pressure and give a selective
advantage to the resistant bacteria. In addition, resistance
genes can be transmitted between bacteria by transformation,
transduction or conjugation.
44. Resistance can occur to a single antibiotic or to several
antibiotics. Resistance to one member of a chemical class of
antibiotics may arise and may provide resistance to all members
of that group, or be restricted to a particular member, dependent
upon the resistance mechanism. Some recently described mechanisms
give rise to multiple antibiotic resistance ie. to several
antibiotics of different chemical classes. The extent of this
type of resistance is not known but it can occur in up to 25% of
fluoroquinolone-resistant Escherichia coli and it may be
clinically relevant in other bacterial species.
Chapter 3 : Patterns of antibiotic resistance in bacteria
isolated from food animals
45. In Chapter 3 we deal with the patterns of antibiotic
resistance in bacteria isolated from food animals in the UK and
elsewhere, including pathogens and commensals. The data we have
seen based on animal isolates of Salmonella spp. suggests that S.
typhimurium comprises the major source of resistance within
animal salmonellas in the UK. Antibiotic resistance is low in
Salmonella enteritidis and high only to certain antibiotics in
Salmonella virchow and Salmonella hadar. Evidence from other
countries suggests that the problem is not limited to the UK,
although we appear to have a higher prevalence of resistance to
antibiotics in S. typhimurium from animals than some other
European countries (eg. Denmark). Epidemics of multi-resistant DT
29 occurred in the UK in the 1960s, and of DTs 193, 204 and 204c
in the 1970s and 1980s, and DT I O4 in the 1990s. Although there
were similarities in the initial emergence of several of these
through cattle, they differed in the extent of their spread and
whether resistance was carried on plasmids (DT204c) or
predominantly on the chromosome (DT 104).
46. We are pleased to see the fall in the number of incidents of
DTIO4 in food animals, and in isolations from humans (see Chapter
5). It is hoped that, over the next few years, there will be
further reductions to at least the levels seen in the 1980s.
However, given the pattern of emergence of different phage types
over the last three decades, we are concerned that
"new" antibiotic-resistant clones of S.typhimurium will
continue to emerge, or old ones re-emerge. The UK data suggest
that the majority of antibiotic resistance seen in salmonellas is
associated with clones of S. typhimurium. Although reasons have
been identified for the spread of some of these clones, we still
need to have a better understanding of the processes which bring
about their emergence and disappearance.
47. We found evidence of differences between Scotland, and
England and Wales in resistance of S. typhimurium isolates from
food animals. In particular, the frequency of nalidixic acid
resistance appeared to be higher in isolates from England and
Wales. It not clear whether the differences between the data sets
reflect usage of fluoroquinolones or methodological differences
in determining resistance. A similar difficulty was found in
comparing Northern Ireland data. We also noted that some
laboratories only screened for nalidixlc acid resistance, whereas
others include enrofloxacin and/or ciprofloxacin. In addition,
arbitrarily chosen breakpoint concentrations by different
laboratories have made it very difficult to compare data on
quinolone resistance. These problems make it difficult to discern
whether there are genuine regional differences in the UK which
might relate to antibiotic usage. We understand that the VLA are
proposing to work towards adopting a standardised disc diffusion
method from the British Society for Antimicrobial Chemotherapy.
We welcome this move if it leads to greater standardisation and
enables comparisons to be made between resistance data from
different sources.
48. Compared to Salmonella spp., we found very little published
data on antibiotic resistance in isolates of Campylobacter from
animals, and we received no data on the situation in Scotland.
Although there is evidence of enrofloxacin and macrolide
resistance, the data are based on small local surveys rather than
national surveillance. This makes it difficult to identify trends
over time or whether there are any regional differences, as there
appear to be for salmonellas. When the limited UK information is
compared to data from other countries, it would appear that the
UK is not unique in seeing resistance in isolates of
Campylobacter from animals. In terms of quinolone and macrolide
resistance, the UK would appear to be no worse than many other
countries. However, there is no room for complacency as
Campylobacter is frequent in poultry and we have seen evidence of
a substantial increase in nalidixic acid resistance in S.
typhimurium isolates associated with chickens and turkeys.
Because Campylobacter spp. rarely causes disease in food animals,
there is currently no national network for speciating, subtyping
or testing antibiotic susceptibility of veterinary isolates of
these bacteria on a routine basis.
49 Antibiotic resistance in Escherichia coli 0 1 57 appears to be
uncommon in isolates from food animals, although we saw no data
on isolates from animals in Scotland or Northern Ireland.
Although some groups of enterovirulent E. coli are significant
pathogens of animals, E.coli 0157 and other -producing serogroups
rarely cause disease in animals. As with Campylobacter, there is
no dedicated national network for testing antibiotic
susceptibility of animal isolates of E. coli 0157, although the
PHLS LEP screen animal isolates submitted by CVL.
50. We understand that MAFF is currently planning to start
surveillance of foodborne pathogens (Salmonella, Campylobacter,
E. coli0157) in cattle, sheep and pigs at slaughter for human
consumption. This surveillance, which is expected to start in
1999, will be undertaken at abattoirs and will include screening
of isolates for antibiotic resistance.
Whilst welcoming this initiative, there remains a need for
longer-term surveillance so that changes can be monitored over
time and in different parts of the UK. We have seen from a study
by Calvert et al. that there can be marked variations in the
geographical distribution of S. typhimurium DTIO4 from cattle and
humans in Scotland, and such factors need to be considered when
planning surveillance. We received evidence that resistance in
foodborne pathogens such as Salmonella and E. coli from poultry
slaughtering plants may not be distributed evenly. We were
informed that there may be "pockets of resistance"
depending on local practices, and clearly these could be missed
if surveillance is not planned in an appropriate way. A well
structured surveillance system in animals for zoonotic foodborne
pathogens would form an important data source for the proposed
Food Standards Agency (FSA). Effective monitoring of foodborne
pathogens at both the animal and human ends of the food chain
will be essential if the FSA is to be successful in tackling
foodborne disease and ensuring the microbiological safety of
food.
51. Although we received information on E. coli other than E.
coli 0157, this was largely based on isolates from sick animals
tested for antibiotic resistance by the Veterinary Investigation
Centres (VICS) in England and Wales. There is a need to extend
monitoring for Salmonella, Campylobacter, E. coli 01 57 and other
E. coli to include "healthy animals". It is important
that monitoring is carried out for E.coli as a whole, as this
organism is a potential marker for tracking resistance through
the food chain.
52. We found little data on Clostridium perfringens and other
anaerobic bacteria in the UK, although Cl. perfringens causes
animal disease as well as food poisoning in humans. We understand
that at present there is limited screening of anaerobic bacteria
for antibiotic resistance and that there are plans for the
Veterinary Laboratories Agency (VLA) to collate this information.
53. There are currently little UK data on the prevalence of
enterococci in food animals. We understand that this is likely to
be addressed by a current industry-funded survey of poultry and
pigs to determine the prevalence of enterococci in animals at
slaughter. The countries involved are Denmark, France,
Netherlands, Sweden, Finland, Spain and the UK. In the UK, only
poultry will be sampled. This survey will also include screening
of isolates for MICs of growth promoters.
Chapter 3 recommendations
54. We recommend that Government should initiate studies to
identify the key factors that lead to the emergence and
disappearance of multiresistant clones of Salmonella typhimurium.
(para. 3.134)
55. Government should ensure that isolates of salmonellas from
animals in England and Wales, Scotland and Northern Ireland are
compared, using appropriate methodologies, to see whether there
are any regional differences in antibiotic susceptibilities.
(para. 3.135)
56. As indicated in Chapters 4 and 5 of our Report, we emphasise
the need for a coordinated approach to surveillance encompassing
the whole food chain. The following recommendations specifically
address veterinary surveillance but need to be considered in
parallel with those in Chapters 4 and 5.
We recommend that the Government considers how the monitoring of
pathogens in food animals could be improved, with a view to
obtaining data on the prevalence, subtypes and antibiotic
resistance of important foodborne pathogens, and publishing this
information on a regular basis (para. 3.136);
we recommend to reference laboratories that the relationship
between antibiotic resistance and subtype of animal isolates of
Campylobacter should be established, to aid further studies aimed
at identifying the sources of antibiotic-resistant strains (para,
3.136);
we recommend to Government that those organisations directing or
undertaking surveillance of organisms isolated from animals
should work together with organisations monitoring resistance in
bacteria from food and humans to produce an annual UK report
summarising antibiotic resistance in the food chain (para.
3.136);
we recommend that surveys of UK veterinary laboratories be
carried out to ascertain current practices with regard to
antibiotic resistance testing of microorganisms important in the
food chain, with a view to improving comparability between
animal, food and human data. (para. 3.136)
57. We recommend to the Veterinary Laboratories Agency (VLA) that
consideration be given to including Escherichia coli in any
surveillance of antibiotic resistance in "healthy" food
animals. (para. 3.137)
58. We recommend that VLA data on resistance in anaerobes are
collated and published at the earliest opportunity. (para. 3.138)
Chapter 4 : Patterns of antibiotic resistance in bacteria
isolated from foodstuffs
59. In Chapter 4 we look at the occurrence of resistant
microorganisms in foodstuffs. The reports we have seen from other
countries suggests that the UK is not unique in having
antibiotic-resistant microorganisms in the food chain. However,
it is not always possible to compare UK data with those from
other countries because of differences in the methodology used
and the prevalence of different subtypes (eg. Salmonella
serotypes). Although there are initiatives by the European
Commission (EC), Office International des Eplzooties (OIE) and
World Health Organisation (WHO) to address surveillance for
antibiotic resistance in clinical isolates, more needs to be done
to address surveillance and standardisation of methods for
microorganisms in the food chain.
60. A major problem in the analysis of antibiotic susceptibility
data was observed in both the UK and international reports and
publications. We found a wide variation in the extent of data
available for foodstuffs. Because the size of studies,
methodology employed, and basis for data collection vary, it is
difficult to make comparisons, particularly between countries,
and interpretation of the data has had to be made on broad trends
in resistance. This is particularly relevant for fluoroquinolones
where use of a high disc concentration (eg. 5mcg) can lead to
under-reporting of resistance. In addition, there is as yet no
standardised methodology for testing susceptibility of
Campylobacter strains to any antibiotic.
61. The low level of resistance and, in particular,
multiresistance in most isolates of Salmonella enteritidis in the
UK is supported by the findings from other countries.
Multiresistance as seen in Salmonella typhimurium isolates from
food in the UK is of particular concern as this serotype is the
second most frequent Salmonella from humans in the UK.
62. We found very little information on campylobacters from foods
in the UK, apart from several local studies. These have provided
some information on quinolone resistance in campylobacters from
raw foods (mostly poultry) and suggest that levels of resistance
are no higher, and may well be lower, than in some other European
countries. Apart from Campylobacter coli, erythromycin resistance
in UK isolates appears to be low.
63. Apart from those collated by the PHLS, there appear to be
little if any published data on resistance in Escherichia coli 0
1 57 isolates from foods. Although the role of antibiotics in
treatment of human infections is unclear, it is important that
resistance in food isolates of this organism, as well as other
verocytotoxin-producing Escherichia coli (VTEC), is actively
monitored.
64. Limited information was found on antibiotic resistance in
food isolates of Clostridium perfringens, Staphyloccocus aureus
and enterococci in the UK. No information was found concerning
resistance in Bacillus cereus.
65. In terms of antibiotic resistance, the main foodborne
pathogens of direct concern are Salmonella (particularly S.
typhimurium), Campylobacter and E. coli. The most extensive data
we received on antibiotic resistance of food isolates of enteric
pathogens in the UK were from the Public Health Laboratory
Service Laboratory of Enteric Pathogens (PHLS LEP). Much of this
information has been derived from screening isolates submitted to
LEP following surveys, outbreak investigations and routine
sampling. Information available from elsewhere in the UK was
considerably more patchy. Data are available for Salmonella, but
even here, there are gaps which make it difficult to discern
national or regional trends or detect changes over time. We are
particularly concerned about the lack of comprehensive data on
antibiotic resistance for Campylobacter, E. coli and other
microorganisms isolated from foodstuffs produced in the UK.
66. We also noted a lack of comprehensive data on antibiotic
resistance for Campylobacter, E. coli and other microorganisms
isolated from foodstuffs imported into the UK. Such information
is essential to determine the effectiveness of measures taken at
national or international levels.
67. Antibiotic resistance screening is often regarded as an
"add on" component to surveys of microorganisms in
foods. However, we feel that its importance needs to be given
greater prominence during the planning phase of studies so that
careful consideration is given to sampling, the use of
appropriate testing methodologies and the archiving of isolates
for future reference. There is a need to strengthen the
information collected in this area and a need for more surveys
where screening for antibiotic resistance is a primary objective
rather than a secondary one.
68. Most of our information on antibiotic resistance in foods
comes from pathogens isolated from raw foods and, to a lesser
extent, ready-to-eat foods, particularly where these are
associated with outbreaks. Although this information is relevant
to consumer exposure to antibiotic-resistant foodborne pathogens,
it forms only part of the picture in terms of the antibiotic
resistance residing in the microbial flora of foods. There
appears to be little information on antibiotic resistance in
relation to the other groups of microorganisms in foods (eg.
other Enterobactertaceae, lactic acid bacteria, pseudomonads,
bacilli etc). Some of these organisms will have intrinsic
resistance to certain antibiotics, a proportion will have been
exposed directly to antibiotics, and others will have acquired
genetic material conferring antibiotic resistance from
interactions within the microflora. The microbial flora and the
component which is antibiotic-resistant may be modified by food
processing procedures (eg. pasteurisation, addition of acidulants
and salt, vacuum or modified atmosphere packaging), interactions
between the microbial flora, as well as temperature, storage time
and food preparation practices prior to consumption.
69. We highlight in Chapter 2 of our Report the widespread
potential amongst bacteria for transfer of genetic material
conferring antibiotic resistance. With this in mind, we found
little information addressing the effect of food processing and
preparation on the antibiotic-resistant microflora of foods or
the effect of these processes on transfer of resistance between
bacteria.
70. We have already highlighted the fact that resistance data on
foodborne pathogens isolated from foods may not reflect
antibiotic resistance present in the microflora of foods as a
whole. We recognise the need for attention to be given to more
general indicator organisms, to enable more sensitive monitoring
of national and regional trends in resistance over time for
particular food commodities. E. coli would appear to fulfil this
role for Gram-negative bacteria and Enterococcus faectum is a
possible candidate for Gram-positive bacteria. E. coli is an
indicator of human or animal faecal contamination and is more
frequent in foodstuffs than Salmonella or Campylobacter. In
addition, although most of the gastrointestinalassociated
infections in man and animals are associated with enterovirulent
strains, the organism is also an important cause of
hospital-acquired infections and is the commonest cause of
urinary tract infection (UTI) in the community.
Chapter 4 recommendations
71. We recommend enhanced national and international surveillance
for antibiotic resistance of microorganisms isolated from foods.
Surveys should be conducted where the primary aim is to gather
information on antibiotic resistance and , in planning future
food microbiological surveys, consideration should be given to
the screening of foodborne pathogens and other microorganisms for
antibiotic resistance using appropriate methodologies. (para.
4.67)
72. We recommend studies to:-
gather further information on antibiotic resistance in
campylobacters in the UK (para. 4.68); and
explore the variability in the isolation of resistant
campylobacters from retail poultry observed in several studies.
(para. 4.68)
73. We recommend that all microbiological reference laboratories
for enteric pathogens in the UK should consider screening these
and other microorgansisms isolated from routine food samples for
antibiotic resistance and publishing their data on a regular
basis. (para. 4.69)
74. As indicated in Chapters 3 and 5 of our Report, we emphasise
the need for a co-ordinated approach to surveillance encompassing
the whole food chain. The following recommendations specifically
address surveillance of food isolates, but need to be considered
in parallel with the recommendations in Chapters 3 and 5.
we recommend to reference laboratories that the relationship
between antibiotic resistance and subtype of food isolates of -
Campylobacter ssp. should be carefully examined to aid further
studies aimed at identifying the sources of antibiotic-resistant
strains (para. 4.70);
we recommend to Government that those organisations directing or
undertaking surveillance of organisms isolated from food should
work together with organisations monitoring resistance in
bacteria from animals and humans to produce an annual UK report
summarising antibiotic resistance in the food chain (para. 4.70);
we recommend that surveys of UK food laboratories be carried out
to ascertain current practices with regard to antibiotic
resistance testing of microorganisms important in the food chain,
with a view to improving comparability between animal, food and
human data. (para. 4.70)
75. We recommend to research funding organisations that studies
be undertaken to assess the effect of food processing, storage
conditions and food preparation on the antibiotic-resistant
microflora of foods and the transfer of resistance between food
bacteria. (para. 4.7 1)
76. We recommend that, using appropriate methodologies,
Escherichia coli isolates from foodstuffs should be screened for
antibiotic resistance, to provide a more sensitive indication of
differences between food commodities and changes in resistance
over time. (para. 4.72)
Chapter 5: Human infections associated with antibiotic resistant
foodborne pathogens
77. Chapter 5 considers the human infections associated with
antibiotic-resistant bacteria which occur in the food chain,
Including trends in both laboratory reports and antibiotic
resistance, for the major foodborne pathogens and other relevant
microorganisms. Again, the position both within and outside the
UK is addressed. Laboratory reports of salmonellas,
campylobacters and Escherichia coli 0157 have increased
substantially over the last 10 years in the UK. Against this
background, there is evidence of an increase in the proportion of
isolates exhibiting resistance to single or multiple antibiotics.
In salmonellas, multiple antibiotic resistance (ie. to four or
more antibiotics) has become more frequent in the epidemiological
important serotypes, Salmonella typhimurium, Salmonella hadar and
Salmonella virchow and, since 1990, there has been an epidemic of
multiresistant S. typhimurium DTIO4 in the UK. Although there was
a 26% decline in isolations of S. typhimurium DTIO4 in 1997,
related multiresistant phage types DTIO4b, U302, U309, U3 10 and
U311 have emerged and will need to be monitored closely. In
addition, genotypically-indistinguishable isolates of
S.typhimurium DTI2 with the same multiresistance pattern, ACSSUT,
have also been identified. The epidemiological changes seen in
Salmonella serotypes over a number of years suggests that a
better understanding is needed of how and why multiresistant
strains emerge and disappear.
78. The data presented in this Chapter have revealed a difference
in the prevalence of ciprofloxacin resistance in salmonellas
screened by reference laboratories in England and Wales (Public
Health Laboratory Service Laboratory of Enteric Pathogens) and
Scotland (Scottish Salmonella Reference Laboratory). We
understand that these laboratories are now using the same
methodology and breakpoint concentrations for defining
resistance, and the differences found require further
investigation.
79. Although there are fewer data available on Campylobacter, we
are particularly concerned about the rise in fluoroquinolone
resistance in the UK over the last 10 years. Although reported
levels are not as high as in other countries (eg. Spain, Taiwan),
this rise is particularly important when set against the
background of a continuing rise in the number of laboratory
reports of Campylobacter from humans.
Macrolides such as erythromycin are currently the drugs of choice
for treating Campylobacter infections and, fortunately, the level
of resistance to this antibiotic in the UK is currently low in
Campylobacter jejuni and moderate in the less common
Campylobacter coli. The emergence of Campylobacter strains
exhibiting both fluoroquinolone and macrolide resistance would
give particular cause for concern and therefore steps should be
taken to reduce or limit the further spread of quinolone and
macrolide resistance in these bacteria. As highlighted in our
Interim Report on Campylobacter, there is a need for better
typing systems for these organisms. Whilst welcoming the various
initiatives underway or being considered in this area, we are
concerned that there is little information on the relationship
between subtypes of Campylobacter and antibiotic resistance, and
this needs to be examined. We understand that this is being
partly addressed for England and Wales by the PHLS Campylobacter
Reference Unit at LEP.
80 Only limited information is available on antibiotic resistance
in E. coli 0157. Evidence suggests that there is potential for
the further development of resistance in E. coli 0 1 57 and the
position requires close monitoring.
81. Comparison of veterinary, food and clinical data is often
difficult because of differences in policy and methodology
regarding the screening of microorganisms. We were particularly
impressed by the DANMAP publications from Denmark linking animal,
food and human data on antibiotic resistance with information on
antibiotic use in animals and man. Such publications have the
advantage of bringing relevant data together in one place thereby
making it more accessible to the scientific community. We feel
that something similar should be devised for the UK.
82. As highlighted in previous Chapters of our Report, we are not
convinced that the methodology being used in veterinary, food and
clinical laboratories enables reliable comparisons to be made
between data sets both in the UK and internationally. The
methodology being used in laboratories should be examined with a
view to achieving a consistent approach in assessing resistance
of foodborne microorganisms important in the food chain. We
recognise that various initiatives in this area are already
planned or underway but most only address the problem from either
the clinical or veterinary perspective. The European Enter-net
initiative, funded by the European Commission, should help in the
harmonization of laboratory methods for measuring and recording
antibiotic resistance patterns for salmonellas in some
laboratories in Europe. However, standardisation and
harmonisation needs to go much wider, encompassing all
laboratories concerned with organisms which might be important in
the food chain.
Chapter 5 recommendations
83. We recommend to funding organisations that research be
undertaken to establish why certain Salmonella serotypes (eg. S.
hadar, S. typhimurium, S. virchow) develop antibiotic resistance
and multiresistance, whereas others (eg. S. enteritidis) have
remained largely sensitive. (para. 5.80)
84. We recommend to Government that the basis for regional
differences in fluoroquinolone (eg. ciprofloxacin) resistance in
salmonellas in the UK should be investigated. (para. 5.81)
85. As indicated in Chapters 3 and 4 of our Report, we emphasise
the need for a coordinated approach to surveillance, encompassing
the whole food chain. The following recommendations specifically
address surveillance of human isolates but need to be considered
in parallel with the recommendations in Chapters 3 and 4:-
we recommend to reference laboratories that the relationship
between antibiotic resistance and subtype of human isolates of
Campylobacter should be carefully examined, to aid further
studies aimed at identifying the sources of antibiotic-resistant
strains (para. 5.82);
we recommend to Government that those organisations directing or
undertaking surveillance of organisms isolated from humans should
work together with organisations monitoring resistance in
bacteria from animals and food to produce an annual UK report
summarising antibiotic resistance in the food chain (para. 5.82);
we recommend that surveys of UK clinical laboratories be carried
out to ascertain current practices with regard to antibiotic
resistance testing of microorganisms important in the food chain,
with a view to improving comparability between animal, food and
human data. (para. 5.82)
86. We have seen in Chapter 4 and 5 that foreign travel and
imported foods are sources of resistant foodborne pathogens, and
that multiresistant bacteria can become world-wide in
distribution (eg. S. typhimurium DTIO4). It is important that we
have appropriate methodology which will allow such organisms to
be monitored for resistance in a consistent and standardised way.
We therefore recommend that Government seeks ways of achieving
further standardisation of antibiotic resistance testing across
Europe and internationally. (para. 5.83)
Chapter 6: Evidence of the food chain contributing to human
infections with antibiotic resistant microorganisms
87. In Chapter 6 we consider the evidence of the food chain
contributing to human infections with antibiotic-resistant
microorganisms. This Chapter also considers other pathways by
which antibiotic-resistant microorganisms may infect humans. We
have seen in Chapter 3 that the intestinal flora of animals can
provide a reservoir of antibiotic-resistant bacteria which can
infect or colonise man via the food chain. Such strains are
frequently found in food animals, particularly cattle, pigs and
poultry, and these or related strains have also been isolated
from companion animals, wild animals, birds and the environment.
88. Information from surveillance of Salmonella spp. in animals,
food and humans strongly supports the view that
antibiotic-resistant strains of these organisms are being
transferred from animals to humans, principally via the food
chain, but also via direct contact with animals, and with
faecally-contaminated environments. It is perhaps no coincidence
that evidence supporting food as a pathway is more secure for
Salmonella spp. than for other pathogens found in the food chain.
The current surveillance system for Salmonella is more extensive,
and typing methods more robust, than for other pathogens, making
it possible to monitor changes in the animal and human
populations. Nevertheless, there is no room for complacency, as
there remains a need for a more co-ordinated approach to the
surveillance of animals, humans and foodstuffs for salmonellas,
as well as fingerprinting methods which enable the source of
resistance to be teased out more effectively. Advances in the
ability to discriminate between strains of resistant salmonellas
such as DTIO4, and to pinpoint the location and mechanism of
resistance genes, should eventually enable the origin(s) of human
isolates to be defined more precisely. We are encouraged by
recent developments in fingerprinting techniques, and the closer
links being established between the Public Health Laboratory
Service and the Veterinary Laboratories Agency. Sound links in
this area are essential, and the proposed Food Standards Agency
and appropriate Government Departments will also need to be
involved in discussions in this area.
89. The evidence we have seen for the transmission of resistant
campylobacters is based on trends observed in quinolone
resistance in animal and human populations. We are concerned that
Campylobacter is currently the most frequent bacterial pathogen
isolated from IID in humans in the UK. At the same time, our
information on subtypes and antibiotic resistance is
significantly weaker than for Salmonella or Escherichia coli
0157. The trend data we have seen appear to indicate a
contribution of veterinary usage of quinolones to resistance in
human isolates of Campylobacter. The picture we see with respect
to fluoroquinolone resistance in salmonellas also points to a
veterinary contribution to this resistance, as illustrated by the
trends in the data for DTIO4. Campylobacters and Salmonella
typhimurium DTIO4 both occur in poultry, and these pathogens are
likely to have been exposed to similar antibiotics. Given the
propensity for Campylobacter and certain salmonellas to develop
quinolone resistance, it seems reasonable to conclude that
veterinary usage of fluoroquinolones will have made a significant
contribution to quinolone resistance in isolates of Campylobacter
and Salmonella from humans. Given the levels of resistance being
seen in some other countries, particularly for Campylobacter, it
is important that fluoroquinolones retain efficacy in the
treatment of human and animal infections.
90. We are concerned about the increasing prevalence of
resistance seen in enterococci, as these organisms could be
transmitted to humans via the food chain. These organisms are
widespread as components of the normal flora of food animals and
humans, and have a propensity to develop multiple resistance to
important antibiotics used, or proposed for use, in human
therapy.
There is clear evidence that the use of the glycopeptides
(avoparcin), macrolides (spiramycin, tylosin) and streptogramins
(virginiamycin) in animal husbandry will select for resistance in
enterococci, and that resistant strains will be found in the food
chain primarily in products of animal origin. The transfer of
resistant strains of animal enterococci, and their resistance
genes through the food chain to humans, could compromise the
treatment in the UK of serious enterococcal and other infections
in humans with existing antibiotics (dalfopristin/quinapristin,
erythromycin, teicoplanin, vancomycin), and with others that are
still under development (everninomycins). Although the full
picture of evidence linking resistance in animal, food and human
isolates is incomplete, taken as a whole we feel that the
information currently available is sufficient to indicate a
genuine problem of resistance in this area, and that the
contribution from resistance arising in enterococci from food
animals is preventable.
91. Based on the limited information currently available, it is
difficult to ascertain the relative contribution of different
foods within the food chain in the flow of resistance to the
human population. For example, enterococcal have been isolated
from meat and poultry, although these products are normally
cooked prior to consumption. Although enterococci are more heat
resistant than many non-spore forming bacteria, they would not be
expected to survive cooking. However, experience shows that
failure to cook properly, or cross-contamination from raw to
cooked foods, means that such organisms can survive and colonise
humans. Limited surveillance suggests that numbers of enterococci
in foods may be quite low, but we have little information about
food consumed in a raw state such as vegetables and fruits,
particularly those products which have been fertilised with
animal manure or sewage sludge.
92. We found some evidence that fermented foods can contain VRE,
and animal products such as certain cheeses, yoghurts and
fermented sausages will contain large numbers of lactic acid
bacteria (enterococci, lactobacilli, pediococci, which will be
consumed. We do not know what contribution organisms in these
foods make to resistance in the food chain nor, perhaps more
importantly, the potential for exchange of resistance genes with
resistant enterococci in animals.
93. The bacterial species which infect those that work in close
proximity with animals, such as farmers, veterinary surgeons and
slaughterhouse workers, usually present little risk to the human
population in general, although there are examples whereby
resistance may spread from these groups to the wider population
(eg. in the case of streptothricin).
94. The environment is clearly a potential source of
antibiotic-resistant organisms which can enter the food chain, or
infect/re-infect animals and humans through contact. There is a
need for more information through research and surveillance and
this is indicated in recommendations in Chapter 12 of our Report.
Chapter 6 recommendations
95. We endorse the recommendation made by the House of Lords
Select Committee on Science and Technology, in their report on
resistance to antibiotics, that "the veterinary profession
must address the problem of over-use of fluoroquinolones"
and feel that targeted codes of practice on prescribing should be
introduced as soon as possible. (para 6.120)
96. We recommend that the relative contribution of meats, dairy
products, raw vegetables and fruits as vehicles for
antibiotic-resistant enterococci should be clarified (para 6.121)
97. In addition, we believe that it is extremely important that
there should be continual surveillance and assessment of the
risks to humans associated with the use of those growth promoters
still authorised in the EU. We make appropriate recommendations
in Chapter 10 of our Report.
Chapter 7: Approval, prescribing and control measures relating to
veterinary medicines
98. Chapter 7 provides background on the conditions governing the
approval, prescribing and control of veterinary medicines. There
is a comprehensive system of controls on veterinary medicines,
based on European Union legislation, in place in the United
Kingdom. No antibiotic is authorised for the treatment of food
animals until the Veterinary Products Committee has satisfied
itself on the questions of safety, quality and efficacy. Included
in safety and efficacy is an assessment of the risks of
resistance and cross-resistance. In relation to new antibiotics,
the VPC operates on the principle that these should not
necessarily be precluded from therapeutic use in animals but that
their prophylactic use should be discouraged.
99. We note that assessment of the risks of resistance and
cross-resistance are included in the examination of safety and
efficacy. We should nevertheless like to see the licensing
authorities throughout the EU making much greater use of relevant
empirical data in the approvals process. By this we mean that,
before antibiotic is authorised for veterinary use, including as
a growth promoter or in medicated animal feed, there should be
testing for microbial antibiotic resistance on the basis of the
trialing of the product concerned in target animal species under
intended conditions of use. The data generated by these trials
should be made publicly available in support of licensing
decisions.
100.We do not advocate prohibition of the therapeutic use of
antibiotics in animals. But there needs to be a structured
approach to the investigation and reporting of the incidence and
prevalence of resistance. The emphasis of the pharmaceutical
industry's efforts has been the establishment of efficacy of the
products they develop and market, and efficacy has not
infrequently been assessed in relation to groups of animals which
have not been exposed to the antibiotic being investigated. We
believe that the regulatory authorities should give a high degree
of attention to the question of microbial antibiotic resistance,
both in the initial licensing process and subsequently at the 5
year licence review stage.
101 As we have noted elsewhere in our Report, it is virtually
impossible at the present time to obtain meaningful data on the
amounts of antibiotics used by the veterinary profession in the
treatment of food animals and, in addition, administered in the
form of medicated feed and growth promoters. The availability of
such information would greatly enhance our ability to identify,
analyse and respond to problems of resistance in a precise and
targeted way and to minimise the potential adverse effects on
food safety.
102 We were told on more than one occasion during the preparation
of this Report that there is an illegal trade in antibiotics
which serves to distort the accuracy of any data on usage. We
were presented with no firm evidence on which to judge the
extent, if any, of such trade. It is not within the remit of this
Committee to pursue the matter but, if there is firm evidence
available of the extent of any illegal trade, the data should be
published alongside any other usage data which may become
available
Chapter 7 recommendations
103 We recommend that the Government, in association with the
other Member States of the European Union, should require
applicants applying for marketing authorisations for antibiotics
for veterinary use to supply data derived from the testing of the
antibiotic concerned for microbial resistance in target animal
species under intended conditions of use. Such data should be
made publicly available in support of licensing decisions. (para.
7.22)
104 We recommend that the Government discusses with the
veterinary profession and the pharmaceutical industry ways in
which the information gathered as part of post-marketing
surveillance, including that on the incidence and prevalence of
resistance, could best be made available to the veterinary and
medical professions. It is important that the regulatory
authorities give a high degree of attention to the question of
microbial antibiotic resistance, both in the initial licensing
process and subsequently at the 5 year licence review stage.
(para. 7.23)
105 We recommend that the Government takes steps to establish the
amounts of antibiotics given to food animals. This information
should be published at regular intervals by the Veterinary
Medicines Directorate and should, at the very least, be so
structured as to provide a breakdown by compound, class, medical
equivalent (where appropriate) and target species. (para. 7.24)
Chapter 8: The use of antibiotics in farm animals
106. In Chapter 8 we look at practices in relation to the use of
antibiotics in farm animals. We are encouraged by a number of
guidelines and statements of intent presented to the Working
Group by the veterinary profession and the farming industry. We
strongly support the following principles which were espoused
during the course of the Group's investigations.
107. Antibiotics should never be used as an easy alternative
option to good husbandry practice and management, site hygiene
or, where it is available, vaccination. All prescribing by
veterinarians must be for animals under their care and all
antibiotics used for purposes other than growth promotion must be
prescription only medicines. Detailed justification should be
provided for the use of "cascade" medicines, perhaps as
part of the written prescription. If the risks of selecting for
resistance are to be minimised, the selection of appropriate
antibiotics is essential. The general rule should be that therapy
should be based on establishing in advance the sensitivity of the
causal organism to the antibiotic treatment proposed. Where
antibiotic treatment is essential, careful diagnosis is necessary
to enable precisely targeted drugs to be used, thus avoiding the
use of broad spectrum products. In all cases, the efficacy of
antibiotics used should be closely monitored to ensure continuing
sensitivity to the treatments of choice. Consideration should
always be given to the question of resistance, particularly when
treating large groups of animals over long periods of time.
108. We welcome the suggestion that the development of
appropriate dosage strategies should be encouraged. Veterinarians
should explore ways of reducing the use of antibiotics in disease
control and should assist with studies into alternatives to
antibiotics, including vaccination, disease eradication, improved
hygiene systems etc. Appropriate codes of practice should be
developed and maintained to encourage heightened awareness of the
role of veterinary prescribing in relation to antibiotic
resistance. Prophylaxis should only be used in clearly defined
circumstances and veterinary practices should develop a written
policy or protocol covering the circumstances in which it is
deemed appropriate. Detailed preventative medicine programmes
should be documented for all livestock-based food production
enterprises, covering routine medication (including
non-prescription medicines such as anticoccidials and growth
promoters), competitive exclusion and probiotic treatments and
vaccines. Prescribing of antibiotic medication should reflect
possible implications for other elements of the programme.
We particularly welcome the British Veterinary Association's
expression of its willingness to adopt a leading role in
informing and guiding the profession in relation to responsible
veterinary prescribing through the promotion of policy, pharmacy
courses, the dissemination of information, guidance on the
selection and administration of antibiotics and on approaches to
the treatment of individual species, and through the publication
and promotion of its Code of Practice on Medicines. In view of
the fact that veterinarians are a very important vehicle for the
supply and administration of veterinary medicinal products, we
would welcome their developing a system of self-audit of
veterinary practice, with special emphasis on the use of
antibiotic substances. We see this as an area where the BVA and
other professional representative bodies could take a helpful
lead.
109 We also welcome the formation in Summer 1998 of the
Responsible Use of Medicines in Agriculture (RUMA) Alliance from
amongst the British Pig Association, British Poultry Meat
Federation, British Retail Consortium, British Veterinary
Association, Meat and Livestock Commission, National Farmers'
Union, National Office of Animal Health, United Kingdom
Agricultural Supply Trade Association and others. We understand
that RUMA's aim is to establish guidelines to help the livestock
industry to reduce its reliance on antibiotics and that
species-specific Working Groups (covering poultry, pigs, beef and
sheep, and the dairy sector) have subsequently been formed to
translate the concept of reduced usage into practical proposals
and to report back to the main RUMA Board. The central theme of
the Groups' terms of reference is to establish and communicate
practical strategies by which the use of antibiotics might be
reduced. We strongly encourage the RUMA Alliance in its
endeavours.
110. The veterinary schools and colleges have a key role to play
in ensuring that the, question of microbial antibiotic resistance
is given a suitably high profile in undergraduate training. As a
first step, existing courses should be reviewed to see whether
the issue of resistance is being appropriately covered and, if
not, they should be redesigned at the earliest opportunity.
111. We regard high standards of on-farm treatment records as an
essential element of any more enlightened approach to the use of
antibiotics. We received some evidence that compliance levels
were extremely poor. Other information which we saw suggested
that performance was appreciably- better, although the data were
based on a very low level of inspections (about 1,600 on-farm
records inspected annually). Greater effort is needed to ensure
that farmers understand their obligations to keep records of
veterinary medicines administered to their animals, that regular
compliance audits are undertaken by the SVS based on a
representative sample of the farm population, and that effective
follow up action can be taken where non-compliance is identified.
112. Hazard Analysis Critical Control Point (HACCP) principles
are fundamental to improving food safety, and the veterinary
profession should bring its skills and influence to bear
throughout the food chain in furtherance of these principles.
We would also encourage closer liaison between all parties
involved in the production, supply, administration and use of
antibiotics in order to monitor developments in microbial
antibiotic resistance and to consider practical options for
addressing emerging trends.
113. We should like to see all farms or production units
receiving regular veterinary visits to audit animal disease
profiles and general performance indicators, to accumulate and
scrutinise mortality, morbidity and general health data, and to
record antibiotic resistance patterns so that antibiotic
prescribing can be adjusted accordingly.
114. The State Veterinary Service (SVS) has a statutory role in
relation to farms, both in terms of animal disease and welfare.
This means that the SVS is ideally placed to take the lead in
encouraging changes which the data generated under management
plans show to be necessary. We hope they will take this task on
board.
115. Given the plethora of farm assurance schemes currently
available, it is important that there is consistency to all
schemes so that data generated can be meaningfully compared
between farms, regions and countries
Chapter 8 recommendations
116. We recommend that the Government coordinates the development
of a coherent strategy aimed at reducing the veterinary use of
antibiotics. (para. 8.47).
117 More specifically, we recommend Government to take all
possible measures to ensure that :-
all antibiotics used for purposes other than growth promotion are
prescription only medicines (POM) (para. 8.48);
all prescribing by veterinarians is for animals under their care
(para. 8.48); and
detailed written justification is provided by veterinarians using
cascade medicines. (para. 8.48)
118. We also recommend that Government brings together the
relevant bodies to produce and publish without delay:-
Codes of Practice aimed at reducing the use of antibiotics (para.
8.49);
appropriate dosage strategies (para. 8.49);
detailed preventative medicine programmes for all livestock-based
food production enterprises covering routine medication
(including the use of anticoccidials and growth promoters), the
length of treatment regimes, competitive exclusion and probiotic
treatments and vaccines (para. 8.49); and
policies and protocols for the use, storage and disposal of
antibiotics (para. 8.49).
119. We recommend that the British Veterinary Association (BVA)
and the other relevant professional representative bodies, in
cooperation with the veterinary schools and colleges, the farming
industry and others, develop appropriate courses to better inform
veterinary prescribing and use of antibiotics and to draw
attention to the potential dangers of resistance. (para. 8.50)
120. We further recommend that the veterinary schools and
colleges review their existing courses to ensure that microbial
antibiotic resistance is given a suitably high profile in
undergraduate training. (para. 8.5 1)
121. It is a requirement of current residues legislation that
specified farm medication records are maintained in a prescribed
format and completed within 72 hours of administration. We regard
high quality record-keeping as essential and recommend that the
Government mounts regular campaigns to remind the livestock
industry of its statutory obligations, to improve enforcement,
and to greatly enhance current performance levels. (para. 8.52)
122. We also recommend that the Government carries out regular,
statistically-robust, compliance surveys and reviews existing
arrangements to ensure that effective follow up action can be
taken where non-compliance is identified. (para. 8.53)
123. We recommend that the Government encourages the use of HACCP
principles as a tool for improving farm practice and as a means
of ensuring the responsible use of antibiotics, thus tackling the
problem of microbial antibiotic resistance. (para. 8.54)
124. We recommend that Government encourages regular veterinary
visits to all livestock farms or production units to audit animal
disease profiles and general performance indicators, to
accumulate and scrutinise mortality, morbidity and general health
data, and to record antibiotic resistance patterns so that
antibiotic prescribing can be adjusted accordingly. (para. 8.55)
Chapter 9: recommendations
125. Chapter 9 considers the role of medicated animal
feedingstuffs in relation to microbial antibiotic resistance. We
have been impressed by the detailed requirements laid down under
the United Kingdom Agricultural Supply Trade (UKASTA) Feed
Assurance Scheme and the Animal Medicines Training Regulatory
Authority (AMTRA) Code of Practice for ensuring that medicated
animal feeds intended for food animals are manufactured, stored
and distributed in a safe and professional manner. Whilst we do
not doubt the dedication of Royal Pharmaceutical Society of Great
Britain (RPSGB), Department of Agriculture for Northern Ireland
(DANI) and Department of Health and Social Services Northern
Ireland (DHSS (NI)) inspectors, we are concerned about the
frequency of inspections. We question whether inspecting feed
mills once a year on average is sufficient and this statistic
leads us to ponder in turn how often on-farm mixers, where the
incorporation of medicines may be rather more haphazard, are
inspected. We recognise that enforcement is necessarily
resource-intensive but it must equally be recognised that regular
compliance monitoring is vital to the effectiveness of control
arrangements.
126. We were struck by what we regard as some anomalies in the
control arrangements. On-farm mixers are exempt from the
provisions of medicated feedingstuffs legislation in respect of
medication administered through drinking water, as well as
through top-dressed feed. The Expert Group on Animal
Feedingstuffs which met under the chairmanship of Professor
Lamming commented on the unsatisfactory nature of this situation
and recommended that on-farm mixers using medicinal additives and
intermediate medicated feedingstuffs in any manner should be
required to register with the RPSGB or DANI. We support the
Lamming view, but are aware that the Government may be
constrained by the limitations of EU legislation.
127. We fully support the aims of the UKASTA Feed Assurance
Scheme. Manufacturers who fall to comply with these should not be
regarded as suitable for registration by the enforcement
authorities. In addition, we strongly encourage all those engaged
in the manufacture of medicated animal feedingstuffs to apply
Hazard Analysis Critical Control Point (HACCP) principles to
their operations. This means not only commercial feed compounders
and the integrated poultry producers but the on-farm mixers too.
128. We have reservations about the treatment of discarded
medicated feed material. The UKASTA Guidelines seek to ensure
that discarded material is reduced to a minimum and is handled
with circumspection. However, there is a general presumption that
much of this material will be reworked into feeds and that this
is acceptable provided suitable care is taken. Whilst there may
be compelling economic reasons to justify the re-use of this
material, the practice gives cause for concern on food safety
grounds.
We would therefore prefer to see discards being appropriately
disposed of as waste material rather than being re-utilised in
batches of feed. We regard this as particularly important in the
case of on-farm mixers where controlling the incorporation of
veterinary medicinal products into animal feed is likely to be
less easily accomplished than in dedicated commercial feed mills.
Chapter 9 recommendations
129. We recommend that the Government:-
requires regular, on-going surveillance of a representative
cross-section of commercial feed compounders, integrated poultry
producers and on-farm mixers to test compliance with the law and
to oversee the guidelines for ensuring that medicated animal
feeds intended for food animals are manufactured, stored and
distributed in a safe and professional manner (para. 9.23); and
reviews the adequacy of the current frequency of inspections by
the enforcement bodies. (para. 9.23)
130. We recommend that on-farm mixers using medicinal additives
and intermediate medicated feedingstuffs in any manner should be
required to register with the Royal Pharmaceutical Society of
Great Britain or the Department of Agriculture for Northern
Ireland. (para. 9.24)
130 We recommend that manufacturers who fail to comply with
UKASTMS Feed Assurance Scheme should not be regarded as suitable
for registration by the enforcement authorities. In addition, we
strongly encourage all those engaged in the manufacture of
medicated animal feedingstuffs to apply Hazard Analysis Critical
Control Point (HACCP) principles to their operations. This means
not only commercial feed compounders and the integrated poultry
producers but the on-farm mixers too. (para. 9.25)
132. We recommend that the Government reviews the arrangements
under which discarded and surplus medicinal additives may be
re-used in medicated feed and medicated pre-mixes with a view to
phasing out this practice in favour of appropriate disposal as
waste material at the earliest opportunity. (para. 9.26)
133. We note from the Food Standards Agency White Paper the
Government's commitment to implementing another recommendation of
the Lamming Report, calling for the establishment of an
independent advisory committee to advise on all matters not
covered by existing advisory committees affecting the safety,
quality and efficacy of animal feeds. No doubt the Government
will consider the extent to which this new committee, when
established, can be utilised in connection with the animal feed
recommendations contained in this Report.
Chapter 10: The use of antibiotics as growth promoters in food
animal production
134. Chapter 10 deals with antibiotic growth promoters. The
Committee's consideration of this subject took place against the
background of Parallel deliberations in the European Union.
Conscious of the pace of EU developments, the likely timetable
for the completion of Microbial Antibiotic Resistance, and the
consequent need for the Committee to provide Ministers with
timely advice in order to assist them in developing the UK's
negotiating position, the Working Groups recommendations on
growth promoters were made available to Ministers in _July 1998,
in advance of the Working Group's draft Report going to the full
A CMSF The text of the letter sent by the Chairman is at Annex H
of our Report.
135. Antibiotic growth promoters stimulate an animal's growth,
mainly by improving daily liveweight gain and feed conversion
efficiency. The mode of action of antibiotic growth promoters is
thought to be associated with their inhibitory effect on
components of the intestinal microflora. Authorisation, use,
labelling and distribution of zootechnical additives (which
include antibiotics and other growth promoters) are governed by
the provisions of Directive 70/524/EEC. Only those additives
listed in the annexes to the Directive may be incorporated into
animal feeds or pre-mixtures for animal feeds. However, there is
no requirement for a feed additive containing a substance listed
in Annex I of Directive 70/524/EEC to be specifically licensed.
EU controls on zootechnical additives are being strengthened in
1998/99. When the fifth amendment to Directive 70/524/EEC enters
effect, a system of product specific approval will apply (ie.
approval will be for a product not a substance).
136. Some in-feed growth promoters used in the UK are related to
antibiotics used in human medicine. Various reports - Swarm,
Lamming, the House of Lords, the House of Commons, WHO -
expressed concern about this situation. Sweden has demonstrated
that it is possible to overcome disease problems in food animals
when the use of growth promoters is stopped, although the Swedish
experience suggests that changes need to be made gradually rather
than suddenly. The EU suspended the use of avoparcin as a growth
promoter in 1997. A surveillance programme for resistant
Enterococcus faecium in pigs and poultry has been established and
the results will be used in reviewing the suspension.
Chapter 10 recommendations
137. The ACMSF's Working Group gave careful consideration to
whether a comprehensive ban on the use of antibiotic growth
promoters, as recommended by the Agriculture Select Committee,
was either necessary or desirable; and, if not, whether
individual growth promoters warranted withdrawal. They concluded
that there should be a two-stage approach.
For those growth promoters where there was a medical equivalent
antibiotic in current or planned use, the Group concluded that
there was sufficient available scientific evidence of microbial
antibiotic resistance to Justify a ban. They therefore
recommended that the use of spiramycin, tylosin phosphate and
virginiamycin as growth promoters should be phased out at the
earliest opportunity. We support this view. (para. 10.25)
138. For those antibiotics where there was currently no medical
equivalent, or where their medical use was rare - avilamycin,
bacitracin zinc, bambermycin, monensin sodium and salinomycin -
the Working Group did not feel that there was currently
sufficient information to justify calling for an immediate ban.
However, they recommended that the use of these substances should
be kept under close review, and if any evidence became available
of medical equivalents being developed for clinical use, then
their use as growth promoters should be phased out. The Group was
particularly concerned about possible developments in the use of
avilamycin and bacitracin zinc for clinical use. We support these
views. (para. 10.26)
139. Finally, the Working Group recommended that no new growth
promoters should be developed which utilise substances which have
possible applications in human clinical treatment. Again, we
support their view. (para. 10.27)
140. It should be stressed that, in supporting the above
recommendations, the Committee subscribes wholly to the relevant
conclusions of the Swarm Committee. We are conscious that, in
calling for the use of spiramycln, tylosin and vlrginiamycin as
growth promoters to be phased out, we run counter to the
philosophy underlying the recommendations of the Scientific
Committee for Animal Nutrition (SCAN) on virginiamycin (and
previously on avoparcin). Whilst SCAN acknowledged that there
were grounds for concern over emerging patterns of resistance,
they concluded that there was currently insufficient evidence of
an immediate risk to public health to justify a ban. In contrast,
our view is that, if human health is to be fully protected, then
our recommendations for action on growth promoters should reflect
the precautionary principle.
141. The EU Agriculture Council decided on 14 December 1998 that
the use of bacitracin zinc, spiramycin, tylosin phosphate and
virginiamycin should be suspended from I January 1999 (but with
provision for the introduction of the suspension to be delayed
for 6 months), the decision to be reviewed in the light of the
results of the surveillance set up following suspension of the
use of avoparcin. We are pleased that this decision reflects the
precautionary principle.
Chapter 11: Aquaculture
142. Chapter 11 of our Report considers the development of fish
farming and the approach of the aquaculture industry to the range
of bacterial diseases encountered. As fish farming has developed
in the UK and in Europe a range of bacterial diseases has been
encountered which caused both major production problems and
animal welfare difficulties. These diseases were initially
controlled by the use of a limited range of antibiotics. Fish
farming is now a sufficiently large and mature industry to have
Justified the development of effective vaccines which have
largely supplanted the use of antibiotics for the most serious
bacterial diseases.
143. For the main fish bacterial diseases, use of antibiotics is
now largely confined to emergency use in the event of breakdown
of vaccine protection. In addition to the increasing availability
of vaccines, fish farming has also developed a range of improved
husbandry methods to reduce the impact of disease. Whilst there
is evidence that antibiotic resistance can be selected for in
normal therapeutic use in aquaculture, the risks of transfer of
such resistance to human consumers by any of the possible routes
appears to be low.
144. New fish species are under development for farming in the UK
and, during the development of these species, bacterial diseases
may be expected to occur which will necessitate the use of
antibiotics for disease control before vaccines can be developed.
If antibiotics were not available in the UK for use with new
species, there would be a danger of development transferring to
countries with poorer controls on antibiotic use.
145. Use of antibiotics in ornamental fish, particularly in
exporting countries, is significant and evidence exists that
multiple antibiotic-resistant bacteria may be frequent in such
animals. Although ornamental fish are not eaten, they do enter
consumers homes and there is close contact.
Chapter 11 recommendations
146. In relation to the development of new fish species for
aquaculture purposes, we recognise that there may be a need to
use antibiotics for bacterial disease control purposes until such
time as appropriate vaccines can be developed. We believe,
however, that, as with salmon and trout farming, the industry
should invest in the development of appropriate vaccines at the
earliest opportunity. To encourage this, we recommend that the
Government should licence the use of antibiotics in new species
being developed for aquaculture for as short a period as is
feasible and equitable. (para. 11. 17)
147. We recommend that the Government issues public advice
warning of
the potential risk of the transfer of antibiotic-resistant
bacteria through direct contact exposure to ornamental fish.
(para. 11. 18)
Chapter 12: Research on microbial antibiotic resistance in
relation to food safety
148. Chapter 12 considers the question of the research and
surveillance needed to improve knowledge of microbial antibiotic
resistance. Attention is given to assessment of the situation,
improved detection of antibiotic-resistant strains,
microbiological risk assessment, improvement, pathogenicity and
clinical outcomes, microbial physiology and ecology, and
mechanisms of resistance and dissemination of resistance
determinants. Our detailed consideration of the very complex
issue of microbial antibiotic resistance in relation to food
safety has inevitably led us to a wide range of recommendations
for research. Funding bodies will clearly wish to consider these
in the light of research sensitivities and priorities. There are
two areas which we regard as particularly important. First, work
is needed on the chain of events which can lead to
antibiotic-resistant microorganisms arising from farming
practices, being transmitted through food chain pathways, and
causing human infection. Second, research is very much needed on
possible exposure of general, animal and food microbial flora to
resistance, with the accompanying risk of the establishment of a
reservoir for the transfer of such resistance to humans.
Chapter 12 recommendations
149. We recommend that research is funded to:-
undertake integrated local surveillance studies to examine the
prevalence of antibiotic resistance associated with
Campylobacter, Salmonella and commensal bacteria in red meat and
poultry throughout slaughter and processing (para. 12.33);
assess the prevalence of antibiotic resistance in wild animals,
including birds, and food animals on farms in relation to the
usage of antibiotics, particularly a) growth promoters and b)
fluoroquinolones. (para. 12.33)
150. We recommend that research is funded to:-
identify risk factors for acquiring an infection with an
antibiotic-resistant foodborne pathogen. Such studies need to be
conducted both in humans and, where appropriate, animals (para.
12.34);
assess the extent of infections in travellers caused by
antibiotic-resistant strains and the contribution these make to
the burden of infectious intestinal disease (IID) and antibiotic
resistance in the UK (para. 12.34);
assess the importance of imported food and animal feed as a
source of antibiotic-resistant bacteria (para. 12.34);
determine the contribution made by microorganisms of human origin
to microbial antibiotic resistance in animals and food (para.
12.34);
model current patterns and predict future trends in antibiotic
resistance of foodborne pathogens in humans and animals (para.
12.34);
determine the socio-economic costs attributable to
antibiotic-resistant foodborne pathogens in humans, above the
costs attributable to antibiotic sensitive foodborne pathogens.
(para.12.34).
151 We recommend that research is funded to develop methods which
will characterise the origins of resistance in foodborne
pathogens and commensal microorganisms, so as to improve
identification of the sources and routes of transfer of resistant
organisms from the farm through food to humans. (para. 12.35)
152. In relation to Microbiological Risk Assessment (MRA) we
recommend that research is funded to:-
undertake structured MRA to assess the risk of infectious
intestinal (IID) disease from antibiotic-resistant foodborne
pathogens and commensal bacteria in food animals, foods and the
environment (para. 12.36);
use MRA to quantify the magnitude of the key pathways by which
microbial antibiotic resistance can transfer from food animals to
humans via the food chain and the environment (para. 12.36);
undertake MRA to assess the links between a) use of growth
promoters and, b) fluoroquinolones, in food animals and the
development of antibiotic-resistant infections in humans. (para.
2.36)
153. To facilitate a reduction in the usage of antibiotics we
recommend that research is funded to :-
underpin effective antibiotic management policies in animals,
aimed at optimising administration practices to minimise the risk
of development of resistance. This will include investigations of
the persistence of antibiotic-resistant bacteria in the
gastrointestinal tract of food animals after antibiotic
withdrawal (para. 12.37);
further investigate how particular hygiene practices and
interventions can bring about a reduction in the need for
antibiotics in food animal production, without jeopardising
animal welfare (para. 12.37);
evaluate the potential of vaccines, probiotics and competitive
exclusion to reduce the usage of antibiotics and the level of
resistance in microorganisms in food animals. (para. 12.37)
154. We recommend that research is conducted to:-
determine the relationship between antibiotic resistance and
virulence in foodborne pathogens in humans and where appropriate,
animals (para. 12.38);
review the clinical picture (duration, severity, treatment and
outcome) of cases of IID involving antibiotic-resistant foodborne
pathogens, as opposed to cases infected with sensitive isolates,
and assess whether there are any longer-term consequences of
these infections for the patient. (para. 12.38)
155. We recommend that research is funded to :-
examine antibiotic-resistant pathogens and commensal organisms
from animals and humans to determine their survival
characteristics in the environment, compared to non-resistant
strains (para. 12.39);
examine the effect of antibiotic selection pressure on the
survival and persistence of antibiotic-resistant strains, both in
vitro and in vivo (para. 12.39);
examine the transfer of resistance determinants between foodborne
pathogens and the commensal flora of humans and animals in a)
foods and b) the environment. (para. 12.39)
Chapter 13: Conclusions and recommendations
156. For the convenience of the reader, we summarise in Chapter
13 of our Report the conclusions that we have drawn in the course
of our investigation of this important topic and the
recommendations which we have made.
ANNEX
ADVISORY COMMITTEE ON THE
MICROBIOLOGICAL SAFETY OF FOOD:
WORKING GROUP ON MICROBIAL ANTIBIOTIC
RESISTANCE IN RELATION TO FOOD SAFETY
Terms of reference
To assess the risks to humans from antibiotic-resistant
microorgani.sms entering the food chain and to consider the need
for any action to protect public health.
Membership
CHAIRMAN
Professor D L Georgala Independent scientific consultant Retired
Director of the Institute of Food Research
VICE CHAIRMAN
Dr G Spriegel Director of Scientific Services, j Sainsbury plc
MEMBERS
Mr JAR Dewhirst Farmer. Member of the East Yorks National
Farmers' Union Pigs Committee. Past member of Farm Animal Welfare
Council. Vice Chairman of the British Pig Association. UK
Chairman of the European Pig Producers'Organisation
Professor C A Hart Department of Medical Microbiology and
GenitoUrinary Medicine, Royal Liverpool University Hospital
Professor A M Johnston Professor of Veterinary Public Health,
Royal Veterinary College, University of London
Dr LJV Piddock Senior Lecturer, Department of Infection,
University of Birmingham
Ms B Saunders Consumer consultant
Dr N A Simmons Emeritus Consultant in Microbiology to the Guy's
and St Thomas'Hospital Trust; Honorary Senior Lecturer in
Microbiology, St Bartholomew's and the Royal London School of
Medicine and Dentistry
Dr DJ Taylor Reader in Veterinary Microbiology, Department of
Veterinary Pathology, University of Glasgow Veterinary School
Dr P Wall Chief Executive of the Food Safety Authority of
Ireland. Formerly Consultant Epidemiologist, Public Health
Laboratory Service Communicable Disease Surveillance Centre
ASSESSORS
Mr PJR Gayford Ministry of Agriculture, Fisheries and Food
Dr L Robinson (a) Department of Health
Dr E M Cooke (b) Department of Health
SECRETARIAT
Administrative Secretary
Mr C R Mylchreest Ministry of Agriculture, Fisheries and Food
Scientific Secretary
Dr P E Cook Department of Health
Administrative Secretariat
Mr P Hayes Department of Health
Mr A Doole (c) Department of Health
(a) Until 26 November 1997
(b) From 12 March 1998
(c) Until 14 August 1998
ADVISORY COMMITTEE ON THE
MICROBIOLOGICAL SAFETY OF FOOD
MEMBERSHIP
CHAIRMAN
Professor D L Georgala Independent scientific consultant. Retired
Director of the Institute of Food Research
MEMBERS
Mr D Clarke Operations Manager, Assured British Meat
Dr T Clayton Technical Executive, Marks and Spencer plc
Professor RJ Gilbert Head of Food Safety Policy Development,
Public Health Laboratory Service. Visiting Professor at the Royal
Veterinary College, University of London
Mrs P Jefford Environmental Health Services Manager, Gravesham
Borough Council
Mr D Kilsby Head of Food Microbiology Research, Unilever plc,
Colworth Laboratory
Professor A M Johnston Professor of Veterinary Public Health,
Royal Veterinary College, University of London
Ms E Lewis Computer consultant. Consumer representative
Dr M J Painter Consultant in Communicable Disease Control,
Infection Control and Surveillance Unit, Public Health Laboratory
Service (North West)
Professor S R Palmer Chairman of Division, Department of
Epidemiology and Public Health, University of Wales College of
Medicine
Dr T A Roberts Retired Head of Microbiology, Institute of Food
Research
Dr N Simmons Emeritus Consultant in Microbiology to the Guy's and
St Thomas' Hospital Trust; Honorary Senior Lecturer in
Microbiology, St Bartholomew's and the Royal London School of
Medicine and Dentistry
Professor W C S Smith Department of Public Health, University of
Aberdeen and Honorary Consultant in Public Health Medicine,
Grampian Health Board, Aberdeen
Dr JV Stevens Group Technical Director, Unigate European Food
Mrs B W Thomas Consumer consultant
Dr T D Wyatt Consultant Clinical Scientist, Mater Hospital Trust,
Belfast
ASSESSORS
Mr PJ R Gayford Ministry of Agriculture, Fisheries and Food
Dr RJ Harding Ministry of Agriculture, Fisheries and Food
Dr C H McMurray Department of Agriculture for Northern Ireland
Dr A Riley Scottish Office Department of Health
Dr E Mitchell Department of Health and Social Services, Northern
Ireland
Dr R Skinner Department of Health
Mr D Worthington Welsh Office
SECRETARIAT
Medical Secretary
Dr J Hilton Department of Health
Administrative Secretary
Mr C R Mylchreest Ministry of Agriculture, Fisheries and Food
Minutes Secretary
Mr P Hayes Department of Health
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